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CAZyme Gene Cluster: MGYG000003351_359|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000003351_02995 | TonB-dependent receptor SusC |
TC | 546 | 3794 | + | 1.B.14.6.1 |
| MGYG000003351_02996 | hypothetical protein |
null | 3820 | 5724 | + | SusD-like_3| SusD_RagB |
| MGYG000003351_02997 | hypothetical protein |
null | 5743 | 7620 | + | DUF5123 |
| MGYG000003351_02998 | hypothetical protein |
CAZyme | 7695 | 9338 | + | CE8 |
| MGYG000003351_02999 | hypothetical protein |
CAZyme | 9435 | 11009 | + | PL1| PL1_2 |
| MGYG000003351_03000 | hypothetical protein |
CAZyme | 11041 | 12705 | + | PL1_2 |
| MGYG000003351_03001 | hypothetical protein |
CAZyme | 12739 | 14235 | + | CE8| PL1| PL1_2 |
| MGYG000003351_03002 | Sensor histidine kinase RcsC |
TF | 14244 | 18809 | - | HTH_AraC |
| MGYG000003351_03003 | hypothetical protein |
CAZyme | 19141 | 20604 | - | CE8| CE12| CE4 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000003351_02998 | ||
| MGYG000003351_02999 | PL1_e44|4.2.2.2 | pectin |
| MGYG000003351_03000 | ||
| MGYG000003351_03001 | PL1_e44|CE8_e45|4.2.2.2 | pectin |
| MGYG000003351_03003 | CE8_e6|CE4_e36|CE12_e9 |
Substrate predicted by dbCAN-PUL is pectin download this fig
